Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 AC007613.1-201ENST00000572811 2597 ntBASIC18.26■□□□□ 0.51
GPC6Q9Y625 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC6Q9Y625 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC6Q9Y625 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 AC098934.4-201ENST00000564127 592 ntBASIC18.24■□□□□ 0.51
GPC6Q9Y625 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GPC6Q9Y625 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC6Q9Y625 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 AC018553.1-201ENST00000616682 1458 ntBASIC18.23■□□□□ 0.51
GPC6Q9Y625 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms