Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 HTR7P1-201ENST00000538670 1336 ntBASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 AL355355.2-201ENST00000442321 338 ntBASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 KRT18P35-201ENST00000510488 1269 ntBASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 AF186192.3-201ENST00000583427 947 ntBASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB1Q9Y5F3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 MMP23A-201ENST00000234610 1017 ntBASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB1Q9Y5F3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB1Q9Y5F3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PCDHB1Q9Y5F3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB1Q9Y5F3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB1Q9Y5F3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHB1Q9Y5F3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB1Q9Y5F3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB1Q9Y5F3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB1Q9Y5F3 FAM197Y1-201ENST00000421178 764 ntBASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB1Q9Y5F3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 AC093484.2-201ENST00000580996 2166 ntBASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms