Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COPS3Q9UNS2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPS3Q9UNS2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COPS3Q9UNS2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COPS3Q9UNS2 AC006333.2-201ENST00000607957 2099 ntBASIC17.22■□□□□ 0.35
COPS3Q9UNS2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
COPS3Q9UNS2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.22■□□□□ 0.35
COPS3Q9UNS2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 ZNF815P-204ENST00000434898 1737 ntBASIC17.21■□□□□ 0.35
COPS3Q9UNS2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 AC022517.1-201ENST00000592429 346 ntBASIC17.21■□□□□ 0.35
COPS3Q9UNS2 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPS3Q9UNS2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.21■□□□□ 0.34
COPS3Q9UNS2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COPS3Q9UNS2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COPS3Q9UNS2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.21■□□□□ 0.34
COPS3Q9UNS2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 MKRN4P-201ENST00000444706 1521 ntBASIC17.2■□□□□ 0.34
COPS3Q9UNS2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPS3Q9UNS2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 BX276092.2-201ENST00000417668 665 ntBASIC17.19■□□□□ 0.34
COPS3Q9UNS2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 AC105036.2-201ENST00000569468 176 ntBASIC17.19■□□□□ 0.34
COPS3Q9UNS2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 AC124283.5-201ENST00000624661 1809 ntBASIC17.19■□□□□ 0.34
COPS3Q9UNS2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COPS3Q9UNS2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms