Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.71■□□□□ 0.59
SNX6Q9UNH7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 TNXA-203ENST00000507684 2038 ntBASIC18.71■□□□□ 0.59
SNX6Q9UNH7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SNX6Q9UNH7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SNX6Q9UNH7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SNX6Q9UNH7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX6Q9UNH7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.69■□□□□ 0.58
SNX6Q9UNH7 UNC93B4-201ENST00000505679 747 ntBASIC18.69■□□□□ 0.58
SNX6Q9UNH7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 KRT18P16-201ENST00000510337 1294 ntBASIC18.69■□□□□ 0.58
SNX6Q9UNH7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 AC141586.3-201ENST00000562166 1838 ntBASIC18.69■□□□□ 0.58
SNX6Q9UNH7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX6Q9UNH7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 AL355802.2-201ENST00000402069 882 ntBASIC18.68■□□□□ 0.58
SNX6Q9UNH7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SNX6Q9UNH7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX6Q9UNH7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNX6Q9UNH7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms