Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 AL445675.2-201ENST00000620291 557 ntBASIC16.33■□□□□ 0.2
RNF7Q9UBF6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 ZNF815P-204ENST00000434898 1737 ntBASIC16.33■□□□□ 0.2
RNF7Q9UBF6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF7Q9UBF6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 AC233702.5-201ENST00000584107 538 ntBASIC16.32■□□□□ 0.2
RNF7Q9UBF6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 AC131212.4-201ENST00000623606 975 ntBASIC16.32■□□□□ 0.2
RNF7Q9UBF6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF7Q9UBF6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 KRT16P1-201ENST00000399124 1418 ntBASIC16.31■□□□□ 0.2
RNF7Q9UBF6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.31■□□□□ 0.2
RNF7Q9UBF6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 RPS2P4-201ENST00000476944 856 ntBASIC16.31■□□□□ 0.2
RNF7Q9UBF6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 AL160286.2-201ENST00000567150 934 ntBASIC16.31■□□□□ 0.2
RNF7Q9UBF6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 Z99916.2-201ENST00000604037 246 ntBASIC16.31■□□□□ 0.2
RNF7Q9UBF6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 CR392000.1-201ENST00000624770 1228 ntBASIC16.31■□□□□ 0.2
RNF7Q9UBF6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF7Q9UBF6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 SLC25A24-204ENST00000569674 2357 ntBASIC16.3■□□□□ 0.2
RNF7Q9UBF6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 AL049637.2-201ENST00000641778 930 ntBASIC16.3■□□□□ 0.2
RNF7Q9UBF6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF7Q9UBF6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms