Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.92■■□□□ 1.1
COL20A1Q9P218 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 SDHAP1-207ENST00000440850 2000 ntBASIC21.92■■□□□ 1.1
COL20A1Q9P218 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.92■■□□□ 1.1
COL20A1Q9P218 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.92■■□□□ 1.1
COL20A1Q9P218 SLC25A1P2-201ENST00000430693 912 ntBASIC21.92■■□□□ 1.1
COL20A1Q9P218 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 AC128688.1-201ENST00000487626 519 ntBASIC21.92■■□□□ 1.1
COL20A1Q9P218 KRT18P35-201ENST00000510488 1269 ntBASIC21.92■■□□□ 1.1
COL20A1Q9P218 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.92■■□□□ 1.1
COL20A1Q9P218 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.92■■□□□ 1.1
COL20A1Q9P218 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.92■■□□□ 1.1
COL20A1Q9P218 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL20A1Q9P218 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.91■■□□□ 1.1
COL20A1Q9P218 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
COL20A1Q9P218 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.91■■□□□ 1.1
COL20A1Q9P218 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 AC116562.4-202ENST00000641738 218 ntBASIC21.91■■□□□ 1.1
COL20A1Q9P218 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.91■■□□□ 1.1
COL20A1Q9P218 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.91■■□□□ 1.1
COL20A1Q9P218 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
COL20A1Q9P218 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.91■■□□□ 1.1
COL20A1Q9P218 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL20A1Q9P218 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 AL049597.2-201ENST00000565575 961 ntBASIC21.9■■□□□ 1.1
COL20A1Q9P218 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL20A1Q9P218 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
COL20A1Q9P218 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.9■■□□□ 1.1
COL20A1Q9P218 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.89■■□□□ 1.1
COL20A1Q9P218 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL20A1Q9P218 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL20A1Q9P218 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL20A1Q9P218 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.89■■□□□ 1.09
COL20A1Q9P218 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL20A1Q9P218 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL20A1Q9P218 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.89■■□□□ 1.09
COL20A1Q9P218 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
COL20A1Q9P218 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL20A1Q9P218 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL20A1Q9P218 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL20A1Q9P218 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.89■■□□□ 1.09
COL20A1Q9P218 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL20A1Q9P218 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
COL20A1Q9P218 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL20A1Q9P218 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL20A1Q9P218 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL20A1Q9P218 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL20A1Q9P218 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL20A1Q9P218 HMGA1P5-201ENST00000412453 271 ntBASIC21.88■■□□□ 1.09
COL20A1Q9P218 CCR12P-201ENST00000446203 998 ntBASIC21.88■■□□□ 1.09
COL20A1Q9P218 DUX4L26-201ENST00000489078 1255 ntBASIC21.88■■□□□ 1.09
COL20A1Q9P218 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.88■■□□□ 1.09
COL20A1Q9P218 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.88■■□□□ 1.09
COL20A1Q9P218 AL138966.2-201ENST00000621997 464 ntBASIC21.88■■□□□ 1.09
COL20A1Q9P218 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL20A1Q9P218 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.88■■□□□ 1.09
COL20A1Q9P218 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL20A1Q9P218 TREX1-205ENST00000625293 1783 ntBASIC21.88■■□□□ 1.09
COL20A1Q9P218 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms