Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLN6Q9NWW5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLN6Q9NWW5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLN6Q9NWW5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CLN6Q9NWW5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLN6Q9NWW5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 AC007322.4-201ENST00000509611 723 ntBASIC17.64■□□□□ 0.41
CLN6Q9NWW5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 OR6D1P-202ENST00000641007 5290 ntBASIC17.64■□□□□ 0.41
CLN6Q9NWW5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 TEX21P-204ENST00000641479 1693 ntBASIC17.64■□□□□ 0.41
CLN6Q9NWW5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLN6Q9NWW5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 MCRIP2P1-201ENST00000394346 511 ntBASIC17.63■□□□□ 0.41
CLN6Q9NWW5 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 MFSD11-216ENST00000590393 1141 ntBASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.63■□□□□ 0.41
CLN6Q9NWW5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms