Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RBM28Q9NW13 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RBM28Q9NW13 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RBM28Q9NW13 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 AL049637.2-201ENST00000641778 930 ntBASIC22.46■■□□□ 1.19
RBM28Q9NW13 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RBM28Q9NW13 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RBM28Q9NW13 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RBM28Q9NW13 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.46■■□□□ 1.19
RBM28Q9NW13 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RBM28Q9NW13 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.45■■□□□ 1.19
RBM28Q9NW13 SDHAP1-207ENST00000440850 2000 ntBASIC22.45■■□□□ 1.18
RBM28Q9NW13 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 AC026271.3-201ENST00000571884 352 ntBASIC22.45■■□□□ 1.18
RBM28Q9NW13 CD177P1-201ENST00000606252 935 ntBASIC22.45■■□□□ 1.18
RBM28Q9NW13 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 AC113410.3-201ENST00000623366 203 ntBASIC22.45■■□□□ 1.18
RBM28Q9NW13 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RBM28Q9NW13 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
RBM28Q9NW13 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 FAM197Y1-201ENST00000421178 764 ntBASIC22.44■■□□□ 1.18
RBM28Q9NW13 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 Z85996.1-201ENST00000494644 937 ntBASIC22.44■■□□□ 1.18
RBM28Q9NW13 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.44■■□□□ 1.18
RBM28Q9NW13 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 AL031985.4-201ENST00000642138 673 ntBASIC22.44■■□□□ 1.18
RBM28Q9NW13 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RBM28Q9NW13 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.43■■□□□ 1.18
RBM28Q9NW13 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.43■■□□□ 1.18
RBM28Q9NW13 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RBM28Q9NW13 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.42■■□□□ 1.18
RBM28Q9NW13 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RBM28Q9NW13 AC116562.4-201ENST00000641316 2276 ntBASIC22.42■■□□□ 1.18
RBM28Q9NW13 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RBM28Q9NW13 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RBM28Q9NW13 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RBM28Q9NW13 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
RBM28Q9NW13 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.42■■□□□ 1.18
RBM28Q9NW13 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.42■■□□□ 1.18
RBM28Q9NW13 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.42■■□□□ 1.18
RBM28Q9NW13 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms