Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRDM9Q9NQV7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRDM9Q9NQV7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 AC093484.2-201ENST00000580996 2166 ntBASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 CD177P1-201ENST00000606252 935 ntBASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRDM9Q9NQV7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.27■□□□□ 0.51
PRDM9Q9NQV7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.27■□□□□ 0.51
PRDM9Q9NQV7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.27■□□□□ 0.51
PRDM9Q9NQV7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRDM9Q9NQV7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PRDM9Q9NQV7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRDM9Q9NQV7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRDM9Q9NQV7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 KRT16P1-201ENST00000399124 1418 ntBASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 SNORA78-201ENST00000459373 127 ntBASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AL445675.2-201ENST00000620291 557 ntBASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AC104417.2-201ENST00000562989 1793 ntBASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AC005332.7-201ENST00000614046 2005 ntBASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 Z82202.1-201ENST00000623446 1880 ntBASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.26■□□□□ 0.51
PRDM9Q9NQV7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms