Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC066615.1-201ENST00000640911 628 ntBASIC16.53■□□□□ 0.24
GCM1Q9NP62 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCM1Q9NP62 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GCM1Q9NP62 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCM1Q9NP62 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCM1Q9NP62 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCM1Q9NP62 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCM1Q9NP62 AL135905.2-201ENST00000584934 1404 ntBASIC16.53■□□□□ 0.24
GCM1Q9NP62 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCM1Q9NP62 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCM1Q9NP62 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 HTR7P1-201ENST00000538670 1336 ntBASIC16.52■□□□□ 0.24
GCM1Q9NP62 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCM1Q9NP62 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.52■□□□□ 0.24
GCM1Q9NP62 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.52■□□□□ 0.23
GCM1Q9NP62 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GCM1Q9NP62 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GCM1Q9NP62 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
GCM1Q9NP62 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GCM1Q9NP62 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.52■□□□□ 0.23
GCM1Q9NP62 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.52■□□□□ 0.23
GCM1Q9NP62 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GCM1Q9NP62 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.51■□□□□ 0.23
GCM1Q9NP62 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCM1Q9NP62 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 RPS2P55-201ENST00000397318 883 ntBASIC16.5■□□□□ 0.23
GCM1Q9NP62 AL353807.1-201ENST00000427475 662 ntBASIC16.5■□□□□ 0.23
GCM1Q9NP62 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 AC107956.1-201ENST00000494359 873 ntBASIC16.5■□□□□ 0.23
GCM1Q9NP62 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 C1QL1P1-201ENST00000568105 661 ntBASIC16.5■□□□□ 0.23
GCM1Q9NP62 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 KRT8P8-201ENST00000434750 1448 ntBASIC16.5■□□□□ 0.23
GCM1Q9NP62 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms