Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 AC009113.1-201ENST00000570267 2443 ntBASIC12.96□□□□□ -0.34
SND1-IT1Q9HBX3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 AC019069.1-201ENST00000610008 1333 ntBASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 AC142381.2-201ENST00000566120 298 ntBASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 TERF1P2-201ENST00000583350 1212 ntBASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SND1-IT1Q9HBX3 AC135050.7-201ENST00000624508 2218 ntBASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 COX20-201ENST00000366528 568 ntTSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 KRT16P6-202ENST00000425692 1426 ntBASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SND1-IT1Q9HBX3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 NFIC-211ENST00000641145 8399 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms