Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC40Q9H9A6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC40Q9H9A6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC40Q9H9A6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC40Q9H9A6 LINC01465-201ENST00000408887 1940 ntBASIC19.64■□□□□ 0.73
LRRC40Q9H9A6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC40Q9H9A6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC40Q9H9A6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 AC069544.1-201ENST00000609399 999 ntBASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC40Q9H9A6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 NBPF21P-201ENST00000425093 1451 ntBASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 AC120498.9-201ENST00000339021 3867 ntBASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 AC141586.3-201ENST00000562166 1838 ntBASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 TEX21P-204ENST00000641479 1693 ntBASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC40Q9H9A6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 MTDHP1-201ENST00000605323 784 ntBASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC40Q9H9A6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms