Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SCAF1Q9H7N4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 COPE-203ENST00000351079 907 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 AL353807.1-201ENST00000427475 662 ntBASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 AC009947.2-201ENST00000444014 672 ntBASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 AL049812.1-201ENST00000432563 2267 ntBASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF1Q9H7N4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 CYP21A1P-202ENST00000354927 1481 ntBASIC28.71■■■□□ 2.19
SCAF1Q9H7N4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC28.7■■■□□ 2.19
SCAF1Q9H7N4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
SCAF1Q9H7N4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SCAF1Q9H7N4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SCAF1Q9H7N4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SCAF1Q9H7N4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SCAF1Q9H7N4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AC022616.7-201ENST00000525383 220 ntBASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AK4P3-201ENST00000418260 669 ntBASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AC005829.2-201ENST00000571422 1056 ntBASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 AC073195.1-201ENST00000607241 877 ntBASIC28.69■■■□□ 2.18
SCAF1Q9H7N4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 AC012497.1-201ENST00000429392 575 ntBASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 AC093458.2-201ENST00000623150 629 ntBASIC28.68■■■□□ 2.18
SCAF1Q9H7N4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 AC003102.1-202ENST00000563394 1796 ntBASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 AC027702.1-201ENST00000563810 1770 ntBASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF1Q9H7N4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms