Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CHMP4BQ9H444 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHMP4BQ9H444 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 AC239809.2-201ENST00000415381 517 ntBASIC24.39■■□□□ 1.49
CHMP4BQ9H444 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 AC133681.1-201ENST00000465482 601 ntBASIC24.39■■□□□ 1.49
CHMP4BQ9H444 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHMP4BQ9H444 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 LINC01465-201ENST00000408887 1940 ntBASIC24.38■■□□□ 1.49
CHMP4BQ9H444 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 KRT16P5-201ENST00000455284 522 ntBASIC24.38■■□□□ 1.49
CHMP4BQ9H444 CD99P1-205ENST00000527459 561 ntBASIC24.38■■□□□ 1.49
CHMP4BQ9H444 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CHMP4BQ9H444 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 RN7SL471P-201ENST00000580476 299 ntBASIC24.37■■□□□ 1.49
CHMP4BQ9H444 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHMP4BQ9H444 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHMP4BQ9H444 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 AC110285.5-201ENST00000611501 352 ntBASIC24.35■■□□□ 1.49
CHMP4BQ9H444 AL023875.1-201ENST00000640777 796 ntBASIC24.35■■□□□ 1.49
CHMP4BQ9H444 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms