Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 AL121832.2-201ENST00000610979 668 ntBASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 AL138781.2-201ENST00000617896 1843 ntBASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR2J3Q9H1A7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 DUSP5P2-201ENST00000426873 1033 ntBASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR2J3Q9H1A7 AC090340.1-201ENST00000620778 4980 ntBASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 CROCCP5-201ENST00000436658 830 ntBASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 ZNF815P-204ENST00000434898 1737 ntBASIC17.84■□□□□ 0.45
POLR2J3Q9H1A7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR2J3Q9H1A7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR2J3Q9H1A7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
POLR2J3Q9H1A7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
POLR2J3Q9H1A7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR2J3Q9H1A7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
POLR2J3Q9H1A7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
POLR2J3Q9H1A7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 AC091874.3-201ENST00000512672 1195 ntBASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms