Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCGF1Q9BSM1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.21■□□□□ 0.19
PCGF1Q9BSM1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCGF1Q9BSM1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.21■□□□□ 0.18
PCGF1Q9BSM1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCGF1Q9BSM1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 AP006587.1-201ENST00000534129 1502 ntBASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 AC233702.5-201ENST00000584107 538 ntBASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCGF1Q9BSM1 HTR7P1-201ENST00000538670 1336 ntBASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 PHGDH-210ENST00000641115 1638 ntBASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 BX323043.1-201ENST00000641006 1765 ntBASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 AC018553.1-201ENST00000616682 1458 ntBASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 AL049637.2-201ENST00000641778 930 ntBASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 TMEM179-206ENST00000616017 1645 ntBASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCGF1Q9BSM1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 TSPY7P-201ENST00000431358 1114 ntBASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCGF1Q9BSM1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
PCGF1Q9BSM1 AC116351.2-201ENST00000606540 1585 ntBASIC16.17■□□□□ 0.18
PCGF1Q9BSM1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms