Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 AC098934.4-201ENST00000564127 592 ntBASIC14.29□□□□□ -0.12
ODF3Q96PU9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ODF3Q96PU9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ODF3Q96PU9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ODF3Q96PU9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.29□□□□□ -0.12
ODF3Q96PU9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ODF3Q96PU9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.29□□□□□ -0.12
ODF3Q96PU9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.29□□□□□ -0.12
ODF3Q96PU9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ODF3Q96PU9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 POM121L13P-201ENST00000422362 380 ntBASIC14.28□□□□□ -0.12
ODF3Q96PU9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 AC104771.1-201ENST00000603335 964 ntBASIC14.28□□□□□ -0.12
ODF3Q96PU9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.28□□□□□ -0.12
ODF3Q96PU9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ODF3Q96PU9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.27□□□□□ -0.12
ODF3Q96PU9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ODF3Q96PU9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ODF3Q96PU9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ODF3Q96PU9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.27□□□□□ -0.13
ODF3Q96PU9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
ODF3Q96PU9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.27□□□□□ -0.13
ODF3Q96PU9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ODF3Q96PU9 AL161938.1-201ENST00000569833 2180 ntBASIC14.27□□□□□ -0.13
ODF3Q96PU9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ODF3Q96PU9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.27□□□□□ -0.13
ODF3Q96PU9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ODF3Q96PU9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ODF3Q96PU9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.26□□□□□ -0.13
ODF3Q96PU9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 FP475955.4-201ENST00000623131 1990 ntBASIC14.26□□□□□ -0.13
ODF3Q96PU9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ODF3Q96PU9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ODF3Q96PU9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.26□□□□□ -0.13
ODF3Q96PU9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms