Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CMTM3Q96MX0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CMTM3Q96MX0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.64■□□□□ 0.26
CMTM3Q96MX0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
CMTM3Q96MX0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 MCRIP2P1-201ENST00000394346 511 ntBASIC16.64■□□□□ 0.25
CMTM3Q96MX0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 AC018553.1-201ENST00000616682 1458 ntBASIC16.64■□□□□ 0.25
CMTM3Q96MX0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CMTM3Q96MX0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 YBX1P1-201ENST00000445822 960 ntBASIC16.63■□□□□ 0.25
CMTM3Q96MX0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 AC116351.2-201ENST00000606540 1585 ntBASIC16.63■□□□□ 0.25
CMTM3Q96MX0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CMTM3Q96MX0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 AC105020.6-201ENST00000621523 1217 ntBASIC16.62■□□□□ 0.25
CMTM3Q96MX0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CMTM3Q96MX0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 TERF1P2-201ENST00000583350 1212 ntBASIC16.61■□□□□ 0.25
CMTM3Q96MX0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.61■□□□□ 0.25
CMTM3Q96MX0 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms