Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 IL9RP2-201ENST00000423948 1312 ntBASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 AL117328.2-201ENST00000624617 1940 ntBASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 NUS1P1-201ENST00000446295 882 ntBASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ALMS1Q8TCU4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 KRT8P11-201ENST00000409686 1436 ntBASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 AC012676.1-201ENST00000574705 1949 ntBASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 MIR574-201ENST00000385209 96 ntBASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC13.05□□□□□ -0.32
ALMS1Q8TCU4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 PMS2P1-201ENST00000431037 1228 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms