Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 GOLGA6L3-201ENST00000507199 1679 ntBASIC19■□□□□ 0.63
HMGCLL1Q8TB92 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19■□□□□ 0.63
HMGCLL1Q8TB92 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 KRT18P16-201ENST00000510337 1294 ntBASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCLL1Q8TB92 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 KRT16P5-201ENST00000455284 522 ntBASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 AC142381.4-202ENST00000563973 229 ntBASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 AC004264.1-201ENST00000608354 794 ntBASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
HMGCLL1Q8TB92 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLL1Q8TB92 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms