Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.1■□□□□ 0.49
NUP43Q8NFH3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.09■□□□□ 0.49
NUP43Q8NFH3 AP000974.1-201ENST00000623909 2387 ntBASIC18.09■□□□□ 0.49
NUP43Q8NFH3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
NUP43Q8NFH3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 AC004264.1-201ENST00000608354 794 ntBASIC18.08■□□□□ 0.48
NUP43Q8NFH3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 AL023875.1-201ENST00000640777 796 ntBASIC18.08■□□□□ 0.48
NUP43Q8NFH3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUP43Q8NFH3 SDHAP1-207ENST00000440850 2000 ntBASIC18.08■□□□□ 0.48
NUP43Q8NFH3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 TEX21P-204ENST00000641479 1693 ntBASIC18.07■□□□□ 0.48
NUP43Q8NFH3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 CD99P1-205ENST00000527459 561 ntBASIC18.07■□□□□ 0.48
NUP43Q8NFH3 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 AC098818.2-201ENST00000564925 2320 ntBASIC18.07■□□□□ 0.48
NUP43Q8NFH3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms