Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 RN7SL471P-201ENST00000580476 299 ntBASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 AC004264.1-201ENST00000608354 794 ntBASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 AC087289.5-201ENST00000586076 3175 ntBASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC116Q8IYX3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 AC239809.2-201ENST00000415381 517 ntBASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC116Q8IYX3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 TSPY20P-201ENST00000450910 630 ntBASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 FAM201B-201ENST00000458407 597 ntBASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 AC104417.2-201ENST00000562989 1793 ntBASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC116Q8IYX3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CCDC116Q8IYX3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC116Q8IYX3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 AC124016.1-201ENST00000609552 612 ntBASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC116Q8IYX3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC116Q8IYX3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms