Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC56Q8IYG6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC56Q8IYG6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC56Q8IYG6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.68■□□□□ 0.58
LRRC56Q8IYG6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC56Q8IYG6 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRC56Q8IYG6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC56Q8IYG6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 RPS2P55-201ENST00000397318 883 ntBASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 KSR1P1-201ENST00000446298 240 ntBASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 AP002982.1-201ENST00000492365 877 ntBASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 AC107956.1-201ENST00000494359 873 ntBASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 Z85996.1-201ENST00000494644 937 ntBASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC56Q8IYG6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 AC233702.5-201ENST00000584107 538 ntBASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 Z99916.2-201ENST00000604037 246 ntBASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 AC073195.1-201ENST00000607241 877 ntBASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 AL135905.2-201ENST00000584934 1404 ntBASIC18.66■□□□□ 0.58
LRRC56Q8IYG6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 KRT8P41-201ENST00000533985 1514 ntBASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 AC012618.2-201ENST00000428058 849 ntBASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 TEX21P-204ENST00000641479 1693 ntBASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC56Q8IYG6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC56Q8IYG6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC56Q8IYG6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms