Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SLX4Q8IY92 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SLX4Q8IY92 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SLX4Q8IY92 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.65■■□□□ 1.38
SLX4Q8IY92 AP002383.4-201ENST00000442518 975 ntBASIC23.65■■□□□ 1.38
SLX4Q8IY92 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
SLX4Q8IY92 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.65■■□□□ 1.38
SLX4Q8IY92 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SLX4Q8IY92 AC016734.2-201ENST00000624325 1377 ntBASIC23.65■■□□□ 1.38
SLX4Q8IY92 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SLX4Q8IY92 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLX4Q8IY92 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SLX4Q8IY92 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.38
SLX4Q8IY92 AC026310.3-201ENST00000625186 2373 ntBASIC23.64■■□□□ 1.38
SLX4Q8IY92 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLX4Q8IY92 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.64■■□□□ 1.38
SLX4Q8IY92 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SLX4Q8IY92 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.64■■□□□ 1.38
SLX4Q8IY92 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.64■■□□□ 1.38
SLX4Q8IY92 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.64■■□□□ 1.38
SLX4Q8IY92 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
SLX4Q8IY92 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SLX4Q8IY92 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.64■■□□□ 1.37
SLX4Q8IY92 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLX4Q8IY92 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLX4Q8IY92 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SLX4Q8IY92 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
SLX4Q8IY92 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 AC036111.1-201ENST00000533973 1582 ntBASIC23.63■■□□□ 1.37
SLX4Q8IY92 AC004870.1-201ENST00000315132 882 ntBASIC23.63■■□□□ 1.37
SLX4Q8IY92 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLX4Q8IY92 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.63■■□□□ 1.37
SLX4Q8IY92 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.62■■□□□ 1.37
SLX4Q8IY92 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.62■■□□□ 1.37
SLX4Q8IY92 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 AL732292.2-201ENST00000609649 430 ntBASIC23.62■■□□□ 1.37
SLX4Q8IY92 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SLX4Q8IY92 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLX4Q8IY92 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLX4Q8IY92 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLX4Q8IY92 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLX4Q8IY92 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLX4Q8IY92 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLX4Q8IY92 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SLX4Q8IY92 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLX4Q8IY92 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLX4Q8IY92 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLX4Q8IY92 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLX4Q8IY92 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLX4Q8IY92 AL845331.1-201ENST00000424978 1190 ntBASIC23.6■■□□□ 1.37
SLX4Q8IY92 AC079781.3-201ENST00000449110 356 ntBASIC23.6■■□□□ 1.37
SLX4Q8IY92 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.6■■□□□ 1.37
SLX4Q8IY92 AL031008.1-201ENST00000619963 541 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms