Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 AC007225.1-201ENST00000566331 1836 ntBASIC24.35■■□□□ 1.49
COL23A1Q86Y22 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 SLC25A6P4-201ENST00000586535 553 ntBASIC24.35■■□□□ 1.49
COL23A1Q86Y22 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.35■■□□□ 1.49
COL23A1Q86Y22 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 KRT8P26-201ENST00000534154 1276 ntBASIC24.34■■□□□ 1.49
COL23A1Q86Y22 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 AL671883.3-201ENST00000603274 991 ntBASIC24.34■■□□□ 1.49
COL23A1Q86Y22 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 SMG8-203ENST00000578922 2178 ntBASIC24.34■■□□□ 1.49
COL23A1Q86Y22 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.34■■□□□ 1.49
COL23A1Q86Y22 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 AC034232.1-201ENST00000506026 1064 ntBASIC24.33■■□□□ 1.49
COL23A1Q86Y22 AC106795.1-205ENST00000512851 1056 ntBASIC24.33■■□□□ 1.49
COL23A1Q86Y22 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL23A1Q86Y22 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
COL23A1Q86Y22 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
COL23A1Q86Y22 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
COL23A1Q86Y22 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 AC006128.1-201ENST00000624704 1661 ntBASIC24.32■■□□□ 1.48
COL23A1Q86Y22 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.32■■□□□ 1.48
COL23A1Q86Y22 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 CHCHD2P8-201ENST00000429873 447 ntBASIC24.31■■□□□ 1.48
COL23A1Q86Y22 AC079776.4-201ENST00000511039 504 ntBASIC24.31■■□□□ 1.48
COL23A1Q86Y22 AP002469.2-201ENST00000531724 424 ntBASIC24.31■■□□□ 1.48
COL23A1Q86Y22 AC091304.2-201ENST00000564639 760 ntBASIC24.31■■□□□ 1.48
COL23A1Q86Y22 AL162741.1-201ENST00000565563 1558 ntBASIC24.31■■□□□ 1.48
COL23A1Q86Y22 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL23A1Q86Y22 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.3■■□□□ 1.48
COL23A1Q86Y22 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms