Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 MIR718-201ENST00000390190 70 ntBASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LYSMD3Q7Z3D4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 LINC01465-201ENST00000408887 1940 ntBASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 NIFKP9-201ENST00000419265 221 ntBASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 AL353807.1-201ENST00000427475 662 ntBASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 Z99916.2-201ENST00000604037 246 ntBASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD3Q7Z3D4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 RPS2P55-201ENST00000397318 883 ntBASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 AC107956.1-201ENST00000494359 873 ntBASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 AL353708.3-201ENST00000610272 989 ntBASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 ZNF815P-204ENST00000434898 1737 ntBASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD3Q7Z3D4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 Z82202.1-201ENST00000623446 1880 ntBASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LYSMD3Q7Z3D4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms