Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC093787.1-201ENST00000450396 207 ntBASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 PHGDH-210ENST00000641115 1638 ntBASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCHD4Q6ZW05 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 HLA-G-202ENST00000376815 851 ntBASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 HLA-G-203ENST00000376818 1127 ntBASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 OR10C1-204ENST00000622521 1039 ntBASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCHD4Q6ZW05 KRT17P1-201ENST00000399211 1546 ntBASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 AL161938.1-201ENST00000569833 2180 ntBASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCHD4Q6ZW05 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTCHD4Q6ZW05 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTCHD4Q6ZW05 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PTCHD4Q6ZW05 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PTCHD4Q6ZW05 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTCHD4Q6ZW05 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTCHD4Q6ZW05 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTCHD4Q6ZW05 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 AL049812.1-201ENST00000432563 2267 ntBASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 AC104581.1-202ENST00000635932 2618 ntBASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms