Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.53■□□□□ 0.72
PACS1Q6VY07 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 CD99P1-205ENST00000527459 561 ntBASIC19.53■□□□□ 0.72
PACS1Q6VY07 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.53■□□□□ 0.72
PACS1Q6VY07 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.53■□□□□ 0.72
PACS1Q6VY07 AL121829.2-201ENST00000620908 328 ntBASIC19.53■□□□□ 0.72
PACS1Q6VY07 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PACS1Q6VY07 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
PACS1Q6VY07 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PACS1Q6VY07 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PACS1Q6VY07 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PACS1Q6VY07 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PACS1Q6VY07 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PACS1Q6VY07 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PACS1Q6VY07 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
PACS1Q6VY07 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.52■□□□□ 0.71
PACS1Q6VY07 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 AC120498.9-201ENST00000339021 3867 ntBASIC19.51■□□□□ 0.71
PACS1Q6VY07 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.51■□□□□ 0.71
PACS1Q6VY07 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PACS1Q6VY07 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 AL161938.1-201ENST00000569833 2180 ntBASIC19.5■□□□□ 0.71
PACS1Q6VY07 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PACS1Q6VY07 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.5■□□□□ 0.71
PACS1Q6VY07 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms