Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 AL353719.1-201ENST00000566847 864 ntBASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 AC092667.1-201ENST00000434301 2586 ntBASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC62Q6P9F0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 AC117947.1-201ENST00000427448 529 ntBASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 TSPY17P-201ENST00000450329 467 ntBASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 CA15P1-201ENST00000481698 905 ntBASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 CKBP1-201ENST00000565489 1086 ntBASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC62Q6P9F0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 AC099778.1-201ENST00000568593 1911 ntBASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 AK4P3-201ENST00000418260 669 ntBASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 AC063952.2-201ENST00000498792 1227 ntBASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC62Q6P9F0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC62Q6P9F0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.71■■□□□ 1.07
CCDC62Q6P9F0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms