Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 AC020907.5-201ENST00000624372 1936 ntBASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM53Q6P2H8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 GUSBP6-202ENST00000438529 1198 ntBASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 C2orf69P4-201ENST00000565394 541 ntBASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 AC092118.2-201ENST00000613495 667 ntBASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM53Q6P2H8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 AC104771.1-201ENST00000603335 964 ntBASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM53Q6P2H8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM53Q6P2H8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM53Q6P2H8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM53Q6P2H8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 ID1-201ENST00000376105 1233 ntBASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM53Q6P2H8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM53Q6P2H8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms