Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 MFAP1P1-201ENST00000442257 1255 ntBASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.58■■□□□ 1.05
SWSAP1Q6NVH7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SWSAP1Q6NVH7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 AC104417.2-201ENST00000562989 1793 ntBASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 AC096733.2-201ENST00000609937 1394 ntBASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SWSAP1Q6NVH7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 KRT18P22-201ENST00000402024 1347 ntBASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 RCN1P1-201ENST00000400413 996 ntBASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 C2orf69P3-201ENST00000565542 1120 ntBASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SWSAP1Q6NVH7 AC125437.2-201ENST00000625180 2167 ntBASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 ZNF815P-204ENST00000434898 1737 ntBASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SWSAP1Q6NVH7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 AC005363.2-201ENST00000618631 242 ntBASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SWSAP1Q6NVH7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms