Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 AC125437.2-201ENST00000625180 2167 ntBASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 TREX1-205ENST00000625293 1783 ntBASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 RPS2P55-201ENST00000397318 883 ntBASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 NIFKP9-201ENST00000419265 221 ntBASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 AC107956.1-201ENST00000494359 873 ntBASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.25■□□□□ 0.67
LDLRAP1Q5SW96 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 AC233702.5-201ENST00000584107 538 ntBASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 AC073195.1-201ENST00000607241 877 ntBASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.24■□□□□ 0.67
LDLRAP1Q5SW96 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 KSR1P1-201ENST00000446298 240 ntBASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LDLRAP1Q5SW96 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 Z99916.2-201ENST00000604037 246 ntBASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 AL445675.2-201ENST00000620291 557 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms