Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TUBB8P6-201ENST00000436895 1288 ntBASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 AP003097.1-201ENST00000530657 1135 ntBASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 KRT18P6-201ENST00000555540 1265 ntBASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 AC141586.3-201ENST00000562166 1838 ntBASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP13A4Q4VNC1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP13A4Q4VNC1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATP13A4Q4VNC1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ATP13A4Q4VNC1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 AC026366.1-201ENST00000488803 879 ntBASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP13A4Q4VNC1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 MTDHP1-201ENST00000605323 784 ntBASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ATP13A4Q4VNC1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms