Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 PCDH8P1-201ENST00000428983 2773 ntBASIC20.27■□□□□ 0.84
CBX1P83916 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.27■□□□□ 0.84
CBX1P83916 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CBX1P83916 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CBX1P83916 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.27■□□□□ 0.84
CBX1P83916 AC068587.7-201ENST00000641602 218 ntBASIC20.27■□□□□ 0.84
CBX1P83916 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.27■□□□□ 0.84
CBX1P83916 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.27■□□□□ 0.84
CBX1P83916 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.27■□□□□ 0.84
CBX1P83916 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.27■□□□□ 0.84
CBX1P83916 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CBX1P83916 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.83
CBX1P83916 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CBX1P83916 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CBX1P83916 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CBX1P83916 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CBX1P83916 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
CBX1P83916 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CBX1P83916 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CBX1P83916 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.26■□□□□ 0.83
CBX1P83916 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CBX1P83916 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.26■□□□□ 0.83
CBX1P83916 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CBX1P83916 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CBX1P83916 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
CBX1P83916 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.25■□□□□ 0.83
CBX1P83916 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.25■□□□□ 0.83
CBX1P83916 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 AC010141.3-201ENST00000456659 717 ntBASIC20.25■□□□□ 0.83
CBX1P83916 Z92544.1-202ENST00000571933 1220 ntBASIC20.25■□□□□ 0.83
CBX1P83916 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.25■□□□□ 0.83
CBX1P83916 AC087239.1-201ENST00000622671 572 ntBASIC20.25■□□□□ 0.83
CBX1P83916 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.25■□□□□ 0.83
CBX1P83916 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CBX1P83916 AC011676.5-201ENST00000624864 2660 ntBASIC20.25■□□□□ 0.83
CBX1P83916 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CBX1P83916 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CBX1P83916 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CBX1P83916 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CBX1P83916 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.25■□□□□ 0.83
CBX1P83916 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.24■□□□□ 0.83
CBX1P83916 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX1P83916 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CBX1P83916 KRT18P60-201ENST00000312876 1297 ntBASIC20.24■□□□□ 0.83
CBX1P83916 MIR2861-201ENST00000636310 90 ntBASIC20.24■□□□□ 0.83
CBX1P83916 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CBX1P83916 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CBX1P83916 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.24■□□□□ 0.83
CBX1P83916 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms