Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CCNA1P78396 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNA1P78396 KRT8P11-201ENST00000409686 1436 ntBASIC22.05■■□□□ 1.12
CCNA1P78396 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCNA1P78396 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNA1P78396 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
CCNA1P78396 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CCNA1P78396 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNA1P78396 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNA1P78396 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
CCNA1P78396 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CCNA1P78396 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CCNA1P78396 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNA1P78396 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNA1P78396 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.04■■□□□ 1.12
CCNA1P78396 KRT18P38-201ENST00000449496 1282 ntBASIC22.04■■□□□ 1.12
CCNA1P78396 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.04■■□□□ 1.12
CCNA1P78396 VENTXP5-201ENST00000523979 775 ntBASIC22.04■■□□□ 1.12
CCNA1P78396 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.04■■□□□ 1.12
CCNA1P78396 AL136038.3-201ENST00000561909 1096 ntBASIC22.04■■□□□ 1.12
CCNA1P78396 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.04■■□□□ 1.12
CCNA1P78396 AC069148.1-201ENST00000608741 768 ntBASIC22.04■■□□□ 1.12
CCNA1P78396 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.04■■□□□ 1.12
CCNA1P78396 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNA1P78396 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.04■■□□□ 1.12
CCNA1P78396 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNA1P78396 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CCNA1P78396 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CCNA1P78396 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNA1P78396 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CCNA1P78396 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNA1P78396 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.03■■□□□ 1.12
CCNA1P78396 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.03■■□□□ 1.12
CCNA1P78396 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.03■■□□□ 1.12
CCNA1P78396 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNA1P78396 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.03■■□□□ 1.12
CCNA1P78396 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
CCNA1P78396 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
CCNA1P78396 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.03■■□□□ 1.12
CCNA1P78396 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.03■■□□□ 1.12
CCNA1P78396 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.03■■□□□ 1.12
CCNA1P78396 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.03■■□□□ 1.12
CCNA1P78396 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.03■■□□□ 1.12
CCNA1P78396 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNA1P78396 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNA1P78396 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNA1P78396 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.03■■□□□ 1.12
CCNA1P78396 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNA1P78396 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNA1P78396 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNA1P78396 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CCNA1P78396 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNA1P78396 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.02■■□□□ 1.12
CCNA1P78396 HCG4P8-203ENST00000443049 980 ntBASIC22.02■■□□□ 1.12
CCNA1P78396 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.02■■□□□ 1.12
CCNA1P78396 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.02■■□□□ 1.11
CCNA1P78396 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.02■■□□□ 1.11
CCNA1P78396 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNA1P78396 STARP1-201ENST00000397973 869 ntBASIC22.01■■□□□ 1.11
CCNA1P78396 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCNA1P78396 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNA1P78396 AC112907.2-201ENST00000448639 330 ntBASIC22.01■■□□□ 1.11
CCNA1P78396 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.01■■□□□ 1.11
CCNA1P78396 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNA1P78396 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNA1P78396 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNA1P78396 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CCNA1P78396 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNA1P78396 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCNA1P78396 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CCNA1P78396 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNA1P78396 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNA1P78396 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CCNA1P78396 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CCNA1P78396 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22■■□□□ 1.11
CCNA1P78396 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CCNA1P78396 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22■■□□□ 1.11
CCNA1P78396 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CCNA1P78396 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC22■■□□□ 1.11
CCNA1P78396 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22■■□□□ 1.11
CCNA1P78396 ZNF444P1-201ENST00000559497 298 ntBASIC22■■□□□ 1.11
CCNA1P78396 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNA1P78396 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNA1P78396 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22■■□□□ 1.11
CCNA1P78396 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.99■■□□□ 1.11
CCNA1P78396 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
CCNA1P78396 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CCNA1P78396 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.99■■□□□ 1.11
CCNA1P78396 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CCNA1P78396 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CCNA1P78396 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.99■■□□□ 1.11
CCNA1P78396 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.99■■□□□ 1.11
CCNA1P78396 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.99■■□□□ 1.11
CCNA1P78396 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
CCNA1P78396 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms