Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.88■□□□□ 0.61
YBX1P67809 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.88■□□□□ 0.61
YBX1P67809 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
YBX1P67809 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
YBX1P67809 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
YBX1P67809 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
YBX1P67809 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.87■□□□□ 0.61
YBX1P67809 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
YBX1P67809 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
YBX1P67809 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
YBX1P67809 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
YBX1P67809 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
YBX1P67809 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
YBX1P67809 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
YBX1P67809 AL032819.2-201ENST00000624543 2162 ntBASIC18.86■□□□□ 0.61
YBX1P67809 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
YBX1P67809 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.86■□□□□ 0.61
YBX1P67809 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
YBX1P67809 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
YBX1P67809 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
YBX1P67809 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.86■□□□□ 0.61
YBX1P67809 YBX1P10-201ENST00000444752 975 ntBASIC18.86■□□□□ 0.61
YBX1P67809 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.86■□□□□ 0.61
YBX1P67809 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.86■□□□□ 0.61
YBX1P67809 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.86■□□□□ 0.61
YBX1P67809 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
YBX1P67809 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.86■□□□□ 0.61
YBX1P67809 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.86■□□□□ 0.61
YBX1P67809 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
YBX1P67809 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.85■□□□□ 0.61
YBX1P67809 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
YBX1P67809 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.85■□□□□ 0.61
YBX1P67809 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.85■□□□□ 0.61
YBX1P67809 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.85■□□□□ 0.61
YBX1P67809 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.85■□□□□ 0.61
YBX1P67809 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
YBX1P67809 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.85■□□□□ 0.61
YBX1P67809 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
YBX1P67809 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YBX1P67809 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
YBX1P67809 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.84■□□□□ 0.61
YBX1P67809 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.84■□□□□ 0.61
YBX1P67809 KRT18P16-201ENST00000510337 1294 ntBASIC18.84■□□□□ 0.61
YBX1P67809 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.84■□□□□ 0.61
YBX1P67809 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.84■□□□□ 0.61
YBX1P67809 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.84■□□□□ 0.61
YBX1P67809 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.84■□□□□ 0.61
YBX1P67809 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YBX1P67809 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
YBX1P67809 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms