Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.67□□□□□ -0.22
RPL39P62891 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.67□□□□□ -0.22
RPL39P62891 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL39P62891 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL39P62891 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL39P62891 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RPL39P62891 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 HLA-G-202ENST00000376815 851 ntBASIC13.67□□□□□ -0.22
RPL39P62891 HLA-G-203ENST00000376818 1127 ntBASIC13.67□□□□□ -0.22
RPL39P62891 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RPL39P62891 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RPL39P62891 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RPL39P62891 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL39P62891 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL39P62891 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
RPL39P62891 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL39P62891 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RPL39P62891 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RPL39P62891 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.66□□□□□ -0.22
RPL39P62891 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
RPL39P62891 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.66□□□□□ -0.22
RPL39P62891 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.66□□□□□ -0.22
RPL39P62891 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RPL39P62891 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RPL39P62891 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.66□□□□□ -0.22
RPL39P62891 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPL39P62891 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL39P62891 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
RPL39P62891 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RPL39P62891 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RPL39P62891 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPL39P62891 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RPL39P62891 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms