Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 FAM207BP-201ENST00000447172 505 ntBASIC19.08■□□□□ 0.64
SRP54P61011 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.08■□□□□ 0.64
SRP54P61011 Z85996.1-201ENST00000494644 937 ntBASIC19.08■□□□□ 0.64
SRP54P61011 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.08■□□□□ 0.64
SRP54P61011 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP54P61011 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP54P61011 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.08■□□□□ 0.64
SRP54P61011 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP54P61011 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRP54P61011 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SRP54P61011 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.08■□□□□ 0.64
SRP54P61011 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SRP54P61011 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SRP54P61011 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SRP54P61011 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SRP54P61011 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SRP54P61011 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SRP54P61011 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.07■□□□□ 0.64
SRP54P61011 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SRP54P61011 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 AC091390.4-202ENST00000476426 537 ntBASIC19.07■□□□□ 0.64
SRP54P61011 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.07■□□□□ 0.64
SRP54P61011 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SRP54P61011 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.07■□□□□ 0.64
SRP54P61011 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SRP54P61011 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRP54P61011 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.06■□□□□ 0.64
SRP54P61011 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SRP54P61011 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.06■□□□□ 0.64
SRP54P61011 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SRP54P61011 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 TMPOP1-202ENST00000424642 1267 ntBASIC19.06■□□□□ 0.64
SRP54P61011 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.06■□□□□ 0.64
SRP54P61011 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.06■□□□□ 0.64
SRP54P61011 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.06■□□□□ 0.64
SRP54P61011 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.06■□□□□ 0.64
SRP54P61011 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SRP54P61011 AC010331.1-201ENST00000611423 582 ntBASIC19.06■□□□□ 0.64
SRP54P61011 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SRP54P61011 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.06■□□□□ 0.64
SRP54P61011 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.06■□□□□ 0.64
SRP54P61011 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRP54P61011 LINC01465-201ENST00000408887 1940 ntBASIC19.06■□□□□ 0.64
SRP54P61011 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.05■□□□□ 0.64
SRP54P61011 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.05■□□□□ 0.64
SRP54P61011 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 AL157384.1-201ENST00000445995 2473 ntBASIC19.05■□□□□ 0.64
SRP54P61011 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SRP54P61011 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.05■□□□□ 0.64
SRP54P61011 RN7SL850P-201ENST00000579959 291 ntBASIC19.05■□□□□ 0.64
SRP54P61011 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.05■□□□□ 0.64
SRP54P61011 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRP54P61011 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.05■□□□□ 0.64
SRP54P61011 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SRP54P61011 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRP54P61011 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms