Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WNT3AP56704 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.56■□□□□ 0.72
WNT3AP56704 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.56■□□□□ 0.72
WNT3AP56704 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.56■□□□□ 0.72
WNT3AP56704 HLA-A-209ENST00000638375 975 ntBASIC19.56■□□□□ 0.72
WNT3AP56704 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WNT3AP56704 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.56■□□□□ 0.72
WNT3AP56704 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.56■□□□□ 0.72
WNT3AP56704 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
WNT3AP56704 LINC01465-201ENST00000408887 1940 ntBASIC19.56■□□□□ 0.72
WNT3AP56704 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
WNT3AP56704 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
WNT3AP56704 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
WNT3AP56704 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
WNT3AP56704 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WNT3AP56704 AIRN-201ENST00000601203 4374 ntBASIC19.55■□□□□ 0.72
WNT3AP56704 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.55■□□□□ 0.72
WNT3AP56704 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
WNT3AP56704 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.55■□□□□ 0.72
WNT3AP56704 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.55■□□□□ 0.72
WNT3AP56704 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
WNT3AP56704 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WNT3AP56704 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
WNT3AP56704 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.54■□□□□ 0.72
WNT3AP56704 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.54■□□□□ 0.72
WNT3AP56704 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
WNT3AP56704 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.54■□□□□ 0.72
WNT3AP56704 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
WNT3AP56704 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
WNT3AP56704 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
WNT3AP56704 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.54■□□□□ 0.72
WNT3AP56704 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
WNT3AP56704 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.54■□□□□ 0.72
WNT3AP56704 AL359736.2-201ENST00000621992 437 ntBASIC19.54■□□□□ 0.72
WNT3AP56704 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.54■□□□□ 0.72
WNT3AP56704 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.54■□□□□ 0.72
WNT3AP56704 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.54■□□□□ 0.72
WNT3AP56704 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.54■□□□□ 0.72
WNT3AP56704 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.54■□□□□ 0.72
WNT3AP56704 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
WNT3AP56704 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.53■□□□□ 0.72
WNT3AP56704 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
WNT3AP56704 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.53■□□□□ 0.72
WNT3AP56704 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.53■□□□□ 0.72
WNT3AP56704 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.53■□□□□ 0.72
WNT3AP56704 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
WNT3AP56704 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.53■□□□□ 0.72
WNT3AP56704 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.53■□□□□ 0.72
WNT3AP56704 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.53■□□□□ 0.72
WNT3AP56704 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.53■□□□□ 0.72
WNT3AP56704 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.53■□□□□ 0.72
WNT3AP56704 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.53■□□□□ 0.72
WNT3AP56704 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.53■□□□□ 0.72
WNT3AP56704 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
WNT3AP56704 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
WNT3AP56704 TEX21P-204ENST00000641479 1693 ntBASIC19.52■□□□□ 0.72
WNT3AP56704 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
WNT3AP56704 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.52■□□□□ 0.72
WNT3AP56704 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
WNT3AP56704 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
WNT3AP56704 ABHD17AP1-201ENST00000358206 933 ntBASIC19.52■□□□□ 0.72
WNT3AP56704 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
WNT3AP56704 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
WNT3AP56704 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.52■□□□□ 0.72
WNT3AP56704 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.52■□□□□ 0.72
WNT3AP56704 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.52■□□□□ 0.72
WNT3AP56704 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
WNT3AP56704 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.52■□□□□ 0.72
WNT3AP56704 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms