Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIMK2P53671 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LIMK2P53671 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.5■□□□□ 0.71
LIMK2P53671 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LIMK2P53671 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.5■□□□□ 0.71
LIMK2P53671 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.5■□□□□ 0.71
LIMK2P53671 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.5■□□□□ 0.71
LIMK2P53671 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 MTDHP1-201ENST00000605323 784 ntBASIC19.5■□□□□ 0.71
LIMK2P53671 AC006557.6-201ENST00000623071 864 ntBASIC19.5■□□□□ 0.71
LIMK2P53671 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
LIMK2P53671 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIMK2P53671 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.5■□□□□ 0.71
LIMK2P53671 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.5■□□□□ 0.71
LIMK2P53671 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.5■□□□□ 0.71
LIMK2P53671 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LIMK2P53671 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LIMK2P53671 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
LIMK2P53671 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LIMK2P53671 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.49■□□□□ 0.71
LIMK2P53671 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.49■□□□□ 0.71
LIMK2P53671 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.49■□□□□ 0.71
LIMK2P53671 Z99916.2-201ENST00000604037 246 ntBASIC19.49■□□□□ 0.71
LIMK2P53671 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 AC093503.3-201ENST00000624917 2352 ntBASIC19.49■□□□□ 0.71
LIMK2P53671 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LIMK2P53671 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIMK2P53671 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.49■□□□□ 0.71
LIMK2P53671 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LIMK2P53671 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.48■□□□□ 0.71
LIMK2P53671 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LIMK2P53671 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.48■□□□□ 0.71
LIMK2P53671 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.48■□□□□ 0.71
LIMK2P53671 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.48■□□□□ 0.71
LIMK2P53671 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.48■□□□□ 0.71
LIMK2P53671 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.48■□□□□ 0.71
LIMK2P53671 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LIMK2P53671 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.48■□□□□ 0.71
LIMK2P53671 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.48■□□□□ 0.71
LIMK2P53671 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
LIMK2P53671 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.48■□□□□ 0.71
LIMK2P53671 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.48■□□□□ 0.71
LIMK2P53671 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LIMK2P53671 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
LIMK2P53671 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.47■□□□□ 0.71
LIMK2P53671 MIR4497-201ENST00000583208 89 ntBASIC19.47■□□□□ 0.71
LIMK2P53671 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.47■□□□□ 0.71
LIMK2P53671 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms