Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CR1P49238 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CX3CR1P49238 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CX3CR1P49238 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CX3CR1P49238 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CR1P49238 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CR1P49238 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CX3CR1P49238 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CR1P49238 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.99■□□□□ 0.31
CX3CR1P49238 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.99■□□□□ 0.31
CX3CR1P49238 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CR1P49238 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.99■□□□□ 0.31
CX3CR1P49238 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.99■□□□□ 0.31
CX3CR1P49238 AC104771.1-201ENST00000603335 964 ntBASIC16.99■□□□□ 0.31
CX3CR1P49238 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CX3CR1P49238 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.99■□□□□ 0.31
CX3CR1P49238 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CR1P49238 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CR1P49238 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CR1P49238 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CX3CR1P49238 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.98■□□□□ 0.31
CX3CR1P49238 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.98■□□□□ 0.31
CX3CR1P49238 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.98■□□□□ 0.31
CX3CR1P49238 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.98■□□□□ 0.31
CX3CR1P49238 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.98■□□□□ 0.31
CX3CR1P49238 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.98■□□□□ 0.31
CX3CR1P49238 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.98■□□□□ 0.31
CX3CR1P49238 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.98■□□□□ 0.31
CX3CR1P49238 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.98■□□□□ 0.31
CX3CR1P49238 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.98■□□□□ 0.31
CX3CR1P49238 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.98■□□□□ 0.31
CX3CR1P49238 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.98■□□□□ 0.31
CX3CR1P49238 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CR1P49238 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.98■□□□□ 0.31
CX3CR1P49238 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CX3CR1P49238 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CX3CR1P49238 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 AC004408.2-201ENST00000623613 2777 ntBASIC16.97■□□□□ 0.31
CX3CR1P49238 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 ZNF815P-204ENST00000434898 1737 ntBASIC16.97■□□□□ 0.31
CX3CR1P49238 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.97■□□□□ 0.31
CX3CR1P49238 YBX1P10-201ENST00000444752 975 ntBASIC16.97■□□□□ 0.31
CX3CR1P49238 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.97■□□□□ 0.31
CX3CR1P49238 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.97■□□□□ 0.31
CX3CR1P49238 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CX3CR1P49238 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.97■□□□□ 0.31
CX3CR1P49238 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.97■□□□□ 0.31
CX3CR1P49238 AC120498.8-201ENST00000614275 531 ntBASIC16.97■□□□□ 0.31
CX3CR1P49238 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CX3CR1P49238 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CR1P49238 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.96■□□□□ 0.31
CX3CR1P49238 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.96■□□□□ 0.31
CX3CR1P49238 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.96■□□□□ 0.31
CX3CR1P49238 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.96■□□□□ 0.31
CX3CR1P49238 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms