Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.83■□□□□ 0.28
GDNFP39905 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.83■□□□□ 0.28
GDNFP39905 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.83■□□□□ 0.28
GDNFP39905 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.83■□□□□ 0.28
GDNFP39905 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 AC090164.3-201ENST00000610780 2143 ntBASIC16.83■□□□□ 0.28
GDNFP39905 AC080038.1-201ENST00000611274 1154 ntBASIC16.83■□□□□ 0.28
GDNFP39905 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.82■□□□□ 0.28
GDNFP39905 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GDNFP39905 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.82■□□□□ 0.28
GDNFP39905 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.82■□□□□ 0.28
GDNFP39905 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 AC073111.5-205ENST00000641717 521 ntBASIC16.82■□□□□ 0.28
GDNFP39905 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
GDNFP39905 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.82■□□□□ 0.28
GDNFP39905 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
GDNFP39905 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDNFP39905 AC020916.1-201ENST00000587762 1774 ntBASIC16.82■□□□□ 0.28
GDNFP39905 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GDNFP39905 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
GDNFP39905 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GDNFP39905 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.81■□□□□ 0.28
GDNFP39905 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GDNFP39905 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.81■□□□□ 0.28
GDNFP39905 CYP2T1P-201ENST00000432607 1285 ntBASIC16.81■□□□□ 0.28
GDNFP39905 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.81■□□□□ 0.28
GDNFP39905 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.81■□□□□ 0.28
GDNFP39905 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.81■□□□□ 0.28
GDNFP39905 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.81■□□□□ 0.28
GDNFP39905 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GDNFP39905 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.81■□□□□ 0.28
GDNFP39905 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GDNFP39905 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.81■□□□□ 0.28
GDNFP39905 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GDNFP39905 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDNFP39905 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 AC007322.1-201ENST00000426983 750 ntBASIC16.8■□□□□ 0.28
GDNFP39905 CDCA4P2-201ENST00000441182 718 ntBASIC16.8■□□□□ 0.28
GDNFP39905 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.8■□□□□ 0.28
GDNFP39905 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GDNFP39905 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
GDNFP39905 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 AP001271.2-201ENST00000624018 1556 ntBASIC16.8■□□□□ 0.28
GDNFP39905 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.8■□□□□ 0.28
GDNFP39905 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.8■□□□□ 0.28
GDNFP39905 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 WIZP1-201ENST00000531444 2299 ntBASIC16.8■□□□□ 0.28
GDNFP39905 AP000997.3-201ENST00000623333 2250 ntBASIC16.8■□□□□ 0.28
GDNFP39905 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.8■□□□□ 0.28
GDNFP39905 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDNFP39905 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
GDNFP39905 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms