Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN1P35523 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CLCN1P35523 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.95■■□□□ 1.1
CLCN1P35523 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.95■■□□□ 1.1
CLCN1P35523 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.95■■□□□ 1.1
CLCN1P35523 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.95■■□□□ 1.1
CLCN1P35523 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.95■■□□□ 1.1
CLCN1P35523 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.95■■□□□ 1.1
CLCN1P35523 AL162430.1-201ENST00000480705 870 ntBASIC21.95■■□□□ 1.1
CLCN1P35523 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.95■■□□□ 1.1
CLCN1P35523 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.95■■□□□ 1.1
CLCN1P35523 AC137761.2-201ENST00000561729 223 ntBASIC21.95■■□□□ 1.1
CLCN1P35523 AC145350.3-201ENST00000569033 163 ntBASIC21.95■■□□□ 1.1
CLCN1P35523 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.95■■□□□ 1.1
CLCN1P35523 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.95■■□□□ 1.1
CLCN1P35523 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CLCN1P35523 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.95■■□□□ 1.1
CLCN1P35523 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCN1P35523 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
CLCN1P35523 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CLCN1P35523 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.94■■□□□ 1.1
CLCN1P35523 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCN1P35523 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
CLCN1P35523 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCN1P35523 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLCN1P35523 TERF1P5-201ENST00000477545 1207 ntBASIC21.94■■□□□ 1.1
CLCN1P35523 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.94■■□□□ 1.1
CLCN1P35523 AC010536.3-201ENST00000620306 533 ntBASIC21.94■■□□□ 1.1
CLCN1P35523 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CLCN1P35523 AC084018.2-201ENST00000613093 2607 ntBASIC21.94■■□□□ 1.1
CLCN1P35523 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCN1P35523 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.94■■□□□ 1.1
CLCN1P35523 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCN1P35523 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLCN1P35523 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.94■■□□□ 1.1
CLCN1P35523 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCN1P35523 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
CLCN1P35523 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLCN1P35523 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLCN1P35523 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CLCN1P35523 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CLCN1P35523 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCN1P35523 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CLCN1P35523 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.92■■□□□ 1.1
CLCN1P35523 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.92■■□□□ 1.1
CLCN1P35523 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
CLCN1P35523 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.92■■□□□ 1.1
CLCN1P35523 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CLCN1P35523 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CLCN1P35523 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.92■■□□□ 1.1
CLCN1P35523 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.92■■□□□ 1.1
CLCN1P35523 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CLCN1P35523 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.92■■□□□ 1.1
CLCN1P35523 MIR5787-201ENST00000611784 55 ntBASIC21.92■■□□□ 1.1
CLCN1P35523 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.92■■□□□ 1.1
CLCN1P35523 MIR2861-201ENST00000636310 90 ntBASIC21.92■■□□□ 1.1
CLCN1P35523 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CLCN1P35523 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.92■■□□□ 1.1
CLCN1P35523 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.92■■□□□ 1.1
CLCN1P35523 SIRPAP1-201ENST00000448467 1770 ntBASIC21.92■■□□□ 1.1
CLCN1P35523 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN1P35523 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN1P35523 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms