Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.41■□□□□ 0.86
CTNNA1P35221 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CTNNA1P35221 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.41■□□□□ 0.86
CTNNA1P35221 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CTNNA1P35221 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CTNNA1P35221 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.41■□□□□ 0.86
CTNNA1P35221 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTNNA1P35221 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CTNNA1P35221 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.4■□□□□ 0.86
CTNNA1P35221 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 DUSP5P2-201ENST00000426873 1033 ntBASIC20.4■□□□□ 0.86
CTNNA1P35221 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CTNNA1P35221 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CTNNA1P35221 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.4■□□□□ 0.86
CTNNA1P35221 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.4■□□□□ 0.86
CTNNA1P35221 AL137784.2-201ENST00000607332 1000 ntBASIC20.4■□□□□ 0.86
CTNNA1P35221 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 TEX21P-204ENST00000641479 1693 ntBASIC20.4■□□□□ 0.86
CTNNA1P35221 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CTNNA1P35221 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTNNA1P35221 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.39■□□□□ 0.86
CTNNA1P35221 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTNNA1P35221 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTNNA1P35221 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTNNA1P35221 ZNF815P-204ENST00000434898 1737 ntBASIC20.39■□□□□ 0.86
CTNNA1P35221 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.39■□□□□ 0.85
CTNNA1P35221 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.39■□□□□ 0.85
CTNNA1P35221 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.39■□□□□ 0.85
CTNNA1P35221 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CTNNA1P35221 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CTNNA1P35221 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.39■□□□□ 0.85
CTNNA1P35221 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.39■□□□□ 0.85
CTNNA1P35221 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.39■□□□□ 0.85
CTNNA1P35221 AL161938.1-201ENST00000569833 2180 ntBASIC20.39■□□□□ 0.85
CTNNA1P35221 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTNNA1P35221 AC141586.3-201ENST00000562166 1838 ntBASIC20.39■□□□□ 0.85
CTNNA1P35221 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.38■□□□□ 0.85
CTNNA1P35221 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CTNNA1P35221 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CTNNA1P35221 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 AC007613.1-201ENST00000572811 2597 ntBASIC20.38■□□□□ 0.85
CTNNA1P35221 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.38■□□□□ 0.85
CTNNA1P35221 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.38■□□□□ 0.85
CTNNA1P35221 AC092118.2-201ENST00000613495 667 ntBASIC20.38■□□□□ 0.85
CTNNA1P35221 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CTNNA1P35221 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CTNNA1P35221 AC005082.1-201ENST00000413042 2259 ntBASIC20.38■□□□□ 0.85
CTNNA1P35221 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.38■□□□□ 0.85
CTNNA1P35221 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
CTNNA1P35221 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CTNNA1P35221 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTNNA1P35221 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.37■□□□□ 0.85
CTNNA1P35221 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 AC124283.5-201ENST00000624661 1809 ntBASIC20.37■□□□□ 0.85
CTNNA1P35221 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CTNNA1P35221 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.37■□□□□ 0.85
CTNNA1P35221 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.37■□□□□ 0.85
CTNNA1P35221 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTNNA1P35221 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
CTNNA1P35221 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms