Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC097488.1-201ENST00000507834 756 ntBASIC19.9■□□□□ 0.78
SLC6A4P31645 AP000692.2-201ENST00000608391 879 ntBASIC19.9■□□□□ 0.78
SLC6A4P31645 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC6A4P31645 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A4P31645 CYP2D8P-201ENST00000433633 1490 ntBASIC19.9■□□□□ 0.78
SLC6A4P31645 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SLC6A4P31645 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A4P31645 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
SLC6A4P31645 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SLC6A4P31645 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SLC6A4P31645 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SLC6A4P31645 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SLC6A4P31645 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 FAM207BP-201ENST00000447172 505 ntBASIC19.89■□□□□ 0.77
SLC6A4P31645 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC6A4P31645 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC6A4P31645 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC6A4P31645 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.89■□□□□ 0.77
SLC6A4P31645 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC6A4P31645 AC012306.2-201ENST00000609350 630 ntBASIC19.89■□□□□ 0.77
SLC6A4P31645 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC6A4P31645 AL158211.5-201ENST00000623583 2518 ntBASIC19.89■□□□□ 0.77
SLC6A4P31645 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC6A4P31645 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SLC6A4P31645 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A4P31645 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC6A4P31645 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SLC6A4P31645 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SLC6A4P31645 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLC6A4P31645 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SLC6A4P31645 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC6A4P31645 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC6A4P31645 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC6A4P31645 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.88■□□□□ 0.77
SLC6A4P31645 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
SLC6A4P31645 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC6A4P31645 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A4P31645 SDHAP1-207ENST00000440850 2000 ntBASIC19.88■□□□□ 0.77
SLC6A4P31645 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLC6A4P31645 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC6A4P31645 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SLC6A4P31645 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SLC6A4P31645 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC6A4P31645 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC6A4P31645 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC6A4P31645 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
SLC6A4P31645 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 CRYGFP-201ENST00000418459 633 ntBASIC19.87■□□□□ 0.77
SLC6A4P31645 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC6A4P31645 SLC25A1P4-201ENST00000567977 778 ntBASIC19.87■□□□□ 0.77
SLC6A4P31645 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A4P31645 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC6A4P31645 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SLC6A4P31645 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC6A4P31645 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC6A4P31645 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms