Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.44■□□□□ 0.86
HOXD11P31277 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HOXD11P31277 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.44■□□□□ 0.86
HOXD11P31277 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
HOXD11P31277 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 TBC1D3P4-201ENST00000338790 1075 ntBASIC20.44■□□□□ 0.86
HOXD11P31277 AC006511.2-201ENST00000388966 660 ntBASIC20.44■□□□□ 0.86
HOXD11P31277 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXD11P31277 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXD11P31277 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXD11P31277 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC20.44■□□□□ 0.86
HOXD11P31277 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXD11P31277 AC013444.2-201ENST00000603317 787 ntBASIC20.44■□□□□ 0.86
HOXD11P31277 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.44■□□□□ 0.86
HOXD11P31277 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HOXD11P31277 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXD11P31277 KRT8P45-201ENST00000414328 1447 ntBASIC20.44■□□□□ 0.86
HOXD11P31277 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HOXD11P31277 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HOXD11P31277 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXD11P31277 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXD11P31277 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXD11P31277 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXD11P31277 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXD11P31277 AC013439.1-201ENST00000449965 1239 ntBASIC20.43■□□□□ 0.86
HOXD11P31277 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXD11P31277 MTND3P4-201ENST00000453537 303 ntBASIC20.43■□□□□ 0.86
HOXD11P31277 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXD11P31277 AC021146.11-201ENST00000503319 491 ntBASIC20.43■□□□□ 0.86
HOXD11P31277 COL6A4P2-205ENST00000509855 506 ntBASIC20.43■□□□□ 0.86
HOXD11P31277 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXD11P31277 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.43■□□□□ 0.86
HOXD11P31277 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC20.43■□□□□ 0.86
HOXD11P31277 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXD11P31277 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXD11P31277 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
HOXD11P31277 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
HOXD11P31277 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.43■□□□□ 0.86
HOXD11P31277 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXD11P31277 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXD11P31277 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HOXD11P31277 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXD11P31277 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXD11P31277 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXD11P31277 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HOXD11P31277 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HOXD11P31277 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.42■□□□□ 0.86
HOXD11P31277 RNU2-72P-201ENST00000411175 163 ntBASIC20.42■□□□□ 0.86
HOXD11P31277 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC20.42■□□□□ 0.86
HOXD11P31277 FAM207BP-201ENST00000447172 505 ntBASIC20.42■□□□□ 0.86
HOXD11P31277 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC20.42■□□□□ 0.86
HOXD11P31277 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXD11P31277 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC20.42■□□□□ 0.86
HOXD11P31277 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXD11P31277 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC20.42■□□□□ 0.86
HOXD11P31277 RPL26L1-206ENST00000521476 742 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HOXD11P31277 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.42■□□□□ 0.86
HOXD11P31277 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.42■□□□□ 0.86
HOXD11P31277 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.42■□□□□ 0.86
HOXD11P31277 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.42■□□□□ 0.86
HOXD11P31277 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXD11P31277 BNIP3P38-201ENST00000601117 544 ntBASIC20.42■□□□□ 0.86
HOXD11P31277 AC242628.1-201ENST00000606810 391 ntBASIC20.42■□□□□ 0.86
HOXD11P31277 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HOXD11P31277 OR52B5P-203ENST00000641694 1313 ntBASIC20.42■□□□□ 0.86
HOXD11P31277 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.42■□□□□ 0.86
HOXD11P31277 AL157902.2-201ENST00000623435 1492 ntBASIC20.42■□□□□ 0.86
HOXD11P31277 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXD11P31277 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXD11P31277 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXD11P31277 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXD11P31277 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXD11P31277 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXD11P31277 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
HOXD11P31277 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXD11P31277 MCRIP2P1-201ENST00000394346 511 ntBASIC20.41■□□□□ 0.86
HOXD11P31277 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXD11P31277 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXD11P31277 PGM5P4-201ENST00000421970 445 ntBASIC20.41■□□□□ 0.86
HOXD11P31277 AC117947.1-201ENST00000427448 529 ntBASIC20.41■□□□□ 0.86
HOXD11P31277 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXD11P31277 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXD11P31277 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXD11P31277 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXD11P31277 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXD11P31277 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXD11P31277 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXD11P31277 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXD11P31277 MTND1P24-201ENST00000552175 861 ntBASIC20.41■□□□□ 0.86
HOXD11P31277 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXD11P31277 RN7SL488P-201ENST00000585186 286 ntBASIC20.41■□□□□ 0.86
HOXD11P31277 AC119751.7-201ENST00000600494 245 ntBASIC20.41■□□□□ 0.86
HOXD11P31277 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms