Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
SHC1P29353 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.71■□□□□ 0.43
SHC1P29353 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.71■□□□□ 0.43
SHC1P29353 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.71■□□□□ 0.43
SHC1P29353 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.71■□□□□ 0.43
SHC1P29353 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.71■□□□□ 0.43
SHC1P29353 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.71■□□□□ 0.43
SHC1P29353 AC142381.4-202ENST00000563973 229 ntBASIC17.71■□□□□ 0.43
SHC1P29353 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.71■□□□□ 0.43
SHC1P29353 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.71■□□□□ 0.43
SHC1P29353 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.71■□□□□ 0.43
SHC1P29353 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.71■□□□□ 0.43
SHC1P29353 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SHC1P29353 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SHC1P29353 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.71■□□□□ 0.43
SHC1P29353 AP006587.1-201ENST00000534129 1502 ntBASIC17.71■□□□□ 0.43
SHC1P29353 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHC1P29353 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SHC1P29353 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHC1P29353 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SHC1P29353 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SHC1P29353 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.7■□□□□ 0.42
SHC1P29353 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 NBPF21P-201ENST00000425093 1451 ntBASIC17.7■□□□□ 0.42
SHC1P29353 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SHC1P29353 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SHC1P29353 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SHC1P29353 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.7■□□□□ 0.42
SHC1P29353 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.7■□□□□ 0.42
SHC1P29353 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.7■□□□□ 0.42
SHC1P29353 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.7■□□□□ 0.42
SHC1P29353 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.7■□□□□ 0.42
SHC1P29353 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SHC1P29353 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SHC1P29353 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SHC1P29353 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.7■□□□□ 0.42
SHC1P29353 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SHC1P29353 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHC1P29353 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SHC1P29353 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC1P29353 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SHC1P29353 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC1P29353 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC1P29353 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC1P29353 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC1P29353 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.69■□□□□ 0.42
SHC1P29353 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.69■□□□□ 0.42
SHC1P29353 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC1P29353 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.69■□□□□ 0.42
SHC1P29353 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.69■□□□□ 0.42
SHC1P29353 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SHC1P29353 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC1P29353 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms