Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 AC006333.2-201ENST00000607957 2099 ntBASIC18.35■□□□□ 0.53
PTPN6P29350 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN6P29350 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN6P29350 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN6P29350 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PTPN6P29350 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN6P29350 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.35■□□□□ 0.53
PTPN6P29350 AC026366.1-201ENST00000488803 879 ntBASIC18.35■□□□□ 0.53
PTPN6P29350 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN6P29350 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN6P29350 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN6P29350 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN6P29350 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN6P29350 NEFHP1-201ENST00000412845 2629 ntBASIC18.34■□□□□ 0.53
PTPN6P29350 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN6P29350 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN6P29350 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 AC008403.3-201ENST00000598924 454 ntBASIC18.34■□□□□ 0.53
PTPN6P29350 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN6P29350 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTPN6P29350 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.34■□□□□ 0.53
PTPN6P29350 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN6P29350 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN6P29350 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PTPN6P29350 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN6P29350 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
PTPN6P29350 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.33■□□□□ 0.53
PTPN6P29350 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN6P29350 AC124283.5-201ENST00000624661 1809 ntBASIC18.33■□□□□ 0.53
PTPN6P29350 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN6P29350 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PTPN6P29350 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PTPN6P29350 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPN6P29350 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PTPN6P29350 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN6P29350 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PTPN6P29350 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PTPN6P29350 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPN6P29350 UNC93B4-201ENST00000505679 747 ntBASIC18.33■□□□□ 0.52
PTPN6P29350 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN6P29350 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 SOX15-203ENST00000570788 1093 ntBASIC18.33■□□□□ 0.52
PTPN6P29350 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
PTPN6P29350 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN6P29350 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN6P29350 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN6P29350 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN6P29350 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTPN6P29350 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTPN6P29350 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PTPN6P29350 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN6P29350 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTPN6P29350 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN6P29350 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms