Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PTPN3P26045 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN3P26045 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
PTPN3P26045 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN3P26045 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN3P26045 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN3P26045 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 BX323043.1-201ENST00000641006 1765 ntBASIC19.73■□□□□ 0.75
PTPN3P26045 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN3P26045 AC124016.1-201ENST00000609552 612 ntBASIC19.73■□□□□ 0.75
PTPN3P26045 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.73■□□□□ 0.75
PTPN3P26045 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PTPN3P26045 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN3P26045 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN3P26045 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
PTPN3P26045 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN3P26045 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN3P26045 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN3P26045 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN3P26045 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN3P26045 AC098818.2-201ENST00000564925 2320 ntBASIC19.73■□□□□ 0.75
PTPN3P26045 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 AP000974.1-201ENST00000623909 2387 ntBASIC19.72■□□□□ 0.75
PTPN3P26045 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 AC141586.3-201ENST00000562166 1838 ntBASIC19.72■□□□□ 0.75
PTPN3P26045 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PTPN3P26045 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPN3P26045 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN3P26045 AC133681.1-201ENST00000465482 601 ntBASIC19.72■□□□□ 0.75
PTPN3P26045 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN3P26045 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 LINC01465-201ENST00000408887 1940 ntBASIC19.72■□□□□ 0.75
PTPN3P26045 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN3P26045 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTPN3P26045 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN3P26045 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTPN3P26045 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN3P26045 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTPN3P26045 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTPN3P26045 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN3P26045 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PTPN3P26045 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN3P26045 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN3P26045 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTPN3P26045 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN3P26045 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN3P26045 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN3P26045 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN3P26045 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PTPN3P26045 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTPN3P26045 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTPN3P26045 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTPN3P26045 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PTPN3P26045 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN3P26045 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN3P26045 HLA-A-209ENST00000638375 975 ntBASIC19.7■□□□□ 0.74
PTPN3P26045 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms