Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD2P25440 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.74■□□□□ 0.91
BRD2P25440 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD2P25440 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD2P25440 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
BRD2P25440 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
BRD2P25440 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD2P25440 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
BRD2P25440 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
BRD2P25440 C8orf49-201ENST00000525043 1968 ntBASIC20.74■□□□□ 0.91
BRD2P25440 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRD2P25440 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BRD2P25440 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.73■□□□□ 0.91
BRD2P25440 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
BRD2P25440 KRT8P8-201ENST00000434750 1448 ntBASIC20.73■□□□□ 0.91
BRD2P25440 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRD2P25440 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRD2P25440 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 RPPH1-201ENST00000516869 333 ntBASIC20.73■□□□□ 0.91
BRD2P25440 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.73■□□□□ 0.91
BRD2P25440 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.73■□□□□ 0.91
BRD2P25440 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.73■□□□□ 0.91
BRD2P25440 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 AC093484.2-201ENST00000580996 2166 ntBASIC20.73■□□□□ 0.91
BRD2P25440 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 Z82202.1-201ENST00000623446 1880 ntBASIC20.73■□□□□ 0.91
BRD2P25440 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD2P25440 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BRD2P25440 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD2P25440 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
BRD2P25440 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BRD2P25440 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.72■□□□□ 0.91
BRD2P25440 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.72■□□□□ 0.91
BRD2P25440 AC133681.1-201ENST00000465482 601 ntBASIC20.72■□□□□ 0.91
BRD2P25440 AC098590.1-201ENST00000468126 897 ntBASIC20.72■□□□□ 0.91
BRD2P25440 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD2P25440 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRD2P25440 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD2P25440 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD2P25440 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD2P25440 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRD2P25440 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BRD2P25440 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD2P25440 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.71■□□□□ 0.91
BRD2P25440 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
BRD2P25440 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.71■□□□□ 0.91
BRD2P25440 AC110285.5-201ENST00000611501 352 ntBASIC20.71■□□□□ 0.91
BRD2P25440 AL359736.2-201ENST00000621992 437 ntBASIC20.71■□□□□ 0.91
BRD2P25440 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BRD2P25440 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD2P25440 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD2P25440 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD2P25440 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD2P25440 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD2P25440 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.7■□□□□ 0.91
BRD2P25440 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.7■□□□□ 0.9
BRD2P25440 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRD2P25440 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD2P25440 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
BRD2P25440 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.7■□□□□ 0.9
BRD2P25440 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD2P25440 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.7■□□□□ 0.9
BRD2P25440 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRD2P25440 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BRD2P25440 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms